Most of the story criticism I've heard fall into a handful of categories:

• Overall plot seeming convoluted and hard to follow (which is understandable when you throw both time travel and parallel universes into the same story)

• Whitewashed portrayal of racism used for story aesthetics

• Ending feeling confusing and/or unsatisfying

• Certain story moments feeling out of place and/or undermining things that other story moments set up

I haven't seen much in the way of players expecting/predicting plot twists.